STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004850Proteasome subunit beta; Belongs to the peptidase T1B family. (300 aa)    
Predicted Functional Partners:
CCH79_00007428
Proteasome endopeptidase complex.
   
0.999
CCH79_00017514
AAA domain-containing protein.
   
 0.999
CCH79_00010535
Proteasome subunit beta.
   
 0.999
CCH79_00012331
MPN domain-containing protein.
   
 0.999
CCH79_00011807
Proteasome subunit alpha type.
   
0.999
ENSGAFP00000010382
Proteasome 20S subunit alpha 5.
  
0.999
CCH79_00014033
Proteasome subunit beta.
   
 0.999
CCH79_00000221
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.999
CCH79_00007748
Proteasome subunit alpha type.
  
0.999
CCH79_00004963
MPN domain-containing protein.
   
 0.999
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.