STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGAP2ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. (1224 aa)    
Predicted Functional Partners:
CCH79_00000388
G_PROTEIN_RECEP_F3_4 domain-containing protein.
   
  0.912
CCH79_00018704
Uncharacterized protein.
  
  
 
0.905
CCH79_00007924
G_PROTEIN_RECEP_F3_4 domain-containing protein.
   
  0.896
CCH79_00003729
G_PROTEIN_RECEP_F3_4 domain-containing protein.
   
  0.693
CCH79_00002286
G_PROTEIN_RECEP_F3_4 domain-containing protein.
   
  0.693
ENSGAFP00000009538
Unc-5 netrin receptor B.
    
  0.666
CCH79_00004362
Uncharacterized protein.
   
0.655
ENSGAFP00000006362
ADP-ribosylation factor GTPase activating protein 1.
     
0.652
ENSGAFP00000011541
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1b.
    
  0.598
CCH79_00014007
ANK_REP_REGION domain-containing protein.
    
  0.597
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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