STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008316Uncharacterized protein. (796 aa)    
Predicted Functional Partners:
CCH79_00000373
Uncharacterized protein.
    
  0.598
CCH79_00002909
Uncharacterized protein.
    
  0.583
YTHDC2
Uncharacterized protein.
    
  0.519
CCH79_00019636
PHD-type domain-containing protein.
  
  0.511
ENSGAFP00000006885
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
  0.509
ENSGAFP00000009315
Serum/glucocorticoid regulated kinase family member 3.
    
  0.504
CCH79_00000404
Ribosomal_S10 domain-containing protein.
   
  0.502
CCH79_00017312
CHCH domain-containing protein.
   
  0.499
CCH79_00002946
Uncharacterized protein.
   
  0.498
SPOP
Uncharacterized protein.
   
  0.498
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.