STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000004382Zgc:92275. (479 aa)    
Predicted Functional Partners:
CCH79_00012455
2Fe-2S ferredoxin-type domain-containing protein.
  
 
 0.936
CCH79_00018829
2Fe-2S ferredoxin-type domain-containing protein.
  
 
 0.936
ENSGAFP00000000170
Succinate dehydrogenase complex, subunit A, flavoprotein (Fp).
    
 0.924
CCH79_00005158
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
  
 
 0.922
CCH79_00001367
FAD_binding_3 domain-containing protein.
  
 
 0.916
CCH79_00004504
Uncharacterized protein.
  
 
 0.895
CCH79_00012003
Uncharacterized protein.
  
 
 0.895
ENSGAFP00000009346
annotation not available
  
 
 0.867
CCH79_00020233
FAD-binding FR-type domain-containing protein.
  
 
 0.867
CCH79_00014938
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
  
 
 0.843
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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