ENSGAFP00000004398 protein (Gambusia affinis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGAFP00000004398

annotation not available (379 aa)

Predicted Functional Partners:

SYDE1

0.646

CCH79_00005969

0.630

CCH79_00001575

0.598

CCH79_00004310

0.598

CCH79_00006851

0.577

CCH79_00003776

0.576

CCH79_00019547

0.574

CCH79_00010143

0.573

CCH79_00007805

0.521

CCH79_00011790

0.500

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00001575	CCH79_00019547	ENSGAFP00000011680	ENSGAFP00000024515	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	0.512
CCH79_00001575	ENSGAFP00000004398	ENSGAFP00000011680	ENSGAFP00000004398	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	annotation not available	0.598
CCH79_00003776	CCH79_00005969	ENSGAFP00000015129	ENSGAFP00000010437	Fork-head domain-containing protein.	Fork-head domain-containing protein.	0.406
CCH79_00003776	CCH79_00007805	ENSGAFP00000015129	ENSGAFP00000017846	Fork-head domain-containing protein.	Fork-head domain-containing protein.	0.406
CCH79_00003776	ENSGAFP00000004398	ENSGAFP00000015129	ENSGAFP00000004398	Fork-head domain-containing protein.	annotation not available	0.576
CCH79_00004310	CCH79_00019547	ENSGAFP00000015608	ENSGAFP00000024515	Protein kinase domain-containing protein.	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	0.512
CCH79_00004310	ENSGAFP00000004398	ENSGAFP00000015608	ENSGAFP00000004398	Protein kinase domain-containing protein.	annotation not available	0.598
CCH79_00005969	CCH79_00003776	ENSGAFP00000010437	ENSGAFP00000015129	Fork-head domain-containing protein.	Fork-head domain-containing protein.	0.406
CCH79_00005969	CCH79_00019547	ENSGAFP00000010437	ENSGAFP00000024515	Fork-head domain-containing protein.	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	0.482
CCH79_00005969	ENSGAFP00000004398	ENSGAFP00000010437	ENSGAFP00000004398	Fork-head domain-containing protein.	annotation not available	0.630
CCH79_00006851	ENSGAFP00000004398	ENSGAFP00000014130	ENSGAFP00000004398	Uncharacterized protein.	annotation not available	0.577
CCH79_00007805	CCH79_00003776	ENSGAFP00000017846	ENSGAFP00000015129	Fork-head domain-containing protein.	Fork-head domain-containing protein.	0.406
CCH79_00007805	ENSGAFP00000004398	ENSGAFP00000017846	ENSGAFP00000004398	Fork-head domain-containing protein.	annotation not available	0.521
CCH79_00010143	ENSGAFP00000004398	ENSGAFP00000032559	ENSGAFP00000004398	Uncharacterized protein.	annotation not available	0.573
CCH79_00011790	ENSGAFP00000004398	ENSGAFP00000008914	ENSGAFP00000004398	Uncharacterized protein.	annotation not available	0.500
CCH79_00019547	CCH79_00001575	ENSGAFP00000024515	ENSGAFP00000011680	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.512
CCH79_00019547	CCH79_00004310	ENSGAFP00000024515	ENSGAFP00000015608	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	Protein kinase domain-containing protein.	0.512
CCH79_00019547	CCH79_00005969	ENSGAFP00000024515	ENSGAFP00000010437	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	Fork-head domain-containing protein.	0.482
CCH79_00019547	ENSGAFP00000004398	ENSGAFP00000024515	ENSGAFP00000004398	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	annotation not available	0.574
ENSGAFP00000004398	CCH79_00001575	ENSGAFP00000004398	ENSGAFP00000011680	annotation not available	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.598