STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004852RRM domain-containing protein. (556 aa)    
Predicted Functional Partners:
PLK1
Serine/threonine-protein kinase PLK.
   
 0.969
CCH79_00017318
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.964
CCH79_00018910
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 
 0.962
ENSGAFP00000020766
Aurora kinase A.
   
 0.940
CCH79_00003594
Uncharacterized protein; Belongs to the cyclin family.
   
 
 0.914
CCH79_00013109
Uncharacterized protein.
 
  
 0.886
CCH79_00006936
PAP-associated domain-containing protein.
   
 
 0.826
CCH79_00005744
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.812
CCH79_00011160
Uncharacterized protein.
   
0.811
CCH79_00013799
DUF3453 domain-containing protein.
    
 
 0.809
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.