STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001938Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
B3GALT1
Beta-1,3-galactosyltransferase 1.
   
 
 0.960
CCH79_00011244
Hexosyltransferase.
   
 
 0.959
CCH79_00016825
Uncharacterized protein.
   
 
 0.957
CCH79_00013439
Hexosyltransferase.
   
 
 0.957
ENSGAFP00000019565
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 10 (putative).
   
 
 0.955
B3GNT3
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3.
   
 
 0.955
ENSGAFP00000022259
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2.
   
 
 0.955
CCH79_00018290
Uncharacterized protein.
   
 
 0.954
ENSGAFP00000006399
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2a.
   
 
 0.954
FUT4
Fucosyltransferase 4.
     
 0.954
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.