STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000675Uncharacterized protein. (490 aa)    
Predicted Functional Partners:
CCH79_00013138
Uncharacterized protein.
   
 0.999
CCH79_00015035
B-block_TFIIIC domain-containing protein.
   
 0.976
CCH79_00000678
Uncharacterized protein.
   
 0.967
CCH79_00000623
WD_REPEATS_REGION domain-containing protein.
   
 0.951
CCH79_00001135
SANT domain-containing protein.
    
 0.897
CCH79_00020735
Uncharacterized protein.
    
 0.865
CCH79_00007774
CYCLIN domain-containing protein.
    
 0.865
CCH79_00020569
TFIIB-type domain-containing protein.
    
 0.865
CCH79_00003110
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.851
CCH79_00010962
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.851
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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