STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000004498Growth factor independent 1B transcription repressor. (234 aa)    
Predicted Functional Partners:
CCH79_00000373
Uncharacterized protein.
    
 0.620
CCH79_00005276
BHLH domain-containing protein.
   
 0.611
CCH79_00015166
SWIRM domain-containing protein.
    
 0.608
CCH79_00002909
Uncharacterized protein.
    
  0.583
CCH79_00007700
Uncharacterized protein.
    
 0.580
CCH79_00014619
Uncharacterized protein.
    
 0.580
METAP2-2
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.
    
 
 0.566
CCH79_00016966
Uncharacterized protein.
    
 
 0.529
CCH79_00018305
Homeobox domain-containing protein.
    
 
 0.527
CCH79_00000824
Uncharacterized protein.
      
 0.522
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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