STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012626Uncharacterized protein. (117 aa)    
Predicted Functional Partners:
CCH79_00010560
Uncharacterized protein.
      
 0.552
CCH79_00005283
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
      
 0.543
CCH79_00014433
Uncharacterized protein.
      
 0.543
CCH79_00017045
Sep15_SelM domain-containing protein.
      
 0.543
CCH79_00010085
Uncharacterized protein.
      
 0.533
CCH79_00000201
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.525
CCH79_00009858
Uncharacterized protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
  
 0.485
CCH79_00009109
Sep15_SelM domain-containing protein.
      
 0.482
CCH79_00015134
Uncharacterized protein.
      
 0.461
CCH79_00005488
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
      
 0.453
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.