Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012626Uncharacterized protein. (117 aa)    
Predicted Functional Partners:
CCH79_00017045
Sep15_SelM domain-containing protein.
   
  
 0.735
CCH79_00005283
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
      
 0.730
CCH79_00010560
Uncharacterized protein.
      
 0.730
CCH79_00014433
Uncharacterized protein.
      
 0.729
CCH79_00010085
Uncharacterized protein.
      
 0.728
CCH79_00009858
Uncharacterized protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
  
 0.717
CCH79_00000201
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.715
CCH79_00015134
Uncharacterized protein.
      
 0.713
CCH79_00009109
Sep15_SelM domain-containing protein.
      
 0.703
CCH79_00011672
Uncharacterized protein.
      
 0.687
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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