STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019876Uncharacterized protein. (2386 aa)    
Predicted Functional Partners:
CCH79_00019129
Uncharacterized protein.
   
 0.931
ENSGAFP00000005786
annotation not available
 
      0.597
CCH79_00001300
Uncharacterized protein.
    
  0.555
CCH79_00001430
Uncharacterized protein.
   
 
 0.554
CCH79_00019293
HP domain-containing protein.
   
 
 0.554
CCH79_00000147
Uncharacterized protein; Belongs to the actin family.
    
  0.550
CCH79_00005091
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.547
CCH79_00009870
Aldolase_II domain-containing protein.
    
 
 0.536
CCH79_00001749
Aldolase_II domain-containing protein.
    
 
 0.536
CCH79_00000979
Aldolase_II domain-containing protein.
    
 
 0.536
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (12%) [HD]