STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007545Uncharacterized protein. (352 aa)    
Predicted Functional Partners:
CCH79_00016348
Uncharacterized protein.
    
 0.925
ENSGAFP00000004332
HESX homeobox 1.
    
 0.925
CCH79_00002500
Uncharacterized protein.
    
 
 0.619
ENSGAFP00000011035
Progesterone receptor membrane component 1.
    
 
 0.619
ENSGAFP00000017770
Progesterone receptor membrane component 2.
    
 
 0.606
CCH79_00004198
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.598
CCH79_00016407
PID domain-containing protein.
    
 0.489
CCH79_00000020
PID domain-containing protein.
    
 0.489
CCH79_00012915
PID domain-containing protein.
    
 0.489
ENSGAFP00000015324
GULP PTB domain containing engulfment adaptor 1a.
    
 0.489
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.