STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00013222Uncharacterized protein. (819 aa)    
Predicted Functional Partners:
ENSGAFP00000004774
RUN and SH3 domain containing 2.
 
     0.919
CCH79_00000345
Uncharacterized protein.
  
 0.871
CCH79_00010465
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.868
CCH79_00015458
Uncharacterized protein.
  
 0.832
CCH79_00013777
Uncharacterized protein; Belongs to the terpene cyclase/mutase family.
  
 
 0.795
CCH79_00016289
Nudix hydrolase domain-containing protein.
  
 
 0.794
CCH79_00001453
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
 0.786
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
  
 
 0.767
CCH79_00016886
Uncharacterized protein.
    
 0.748
CCH79_00011549
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.742
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.