STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008325Uncharacterized protein. (682 aa)    
Predicted Functional Partners:
CCH79_00012376
Uncharacterized protein.
    
 0.834
ENSGAFP00000022609
RNA polymerase I subunit A.
    
 0.819
CCH79_00015339
Uncharacterized protein.
    
 0.799
CCH79_00009132
Uncharacterized protein.
    
 0.795
ENSGAFP00000007964
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.794
CCH79_00004975
Uncharacterized protein.
   
 0.794
CCH79_00001361
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.790
CCH79_00019370
Ssl1 domain-containing protein.
    
 0.785
CCH79_00016258
Histone H2A; Belongs to the histone H2A family.
   
 0.783
H2AZ1
Uncharacterized protein; Belongs to the histone H2A family.
   
 0.783
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (32%) [HD]