STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004115Uncharacterized protein. (1238 aa)    
Predicted Functional Partners:
CCH79_00011298
Uncharacterized protein.
   
 0.595
CCH79_00007400
Uncharacterized protein; Belongs to the peptidase C19 family.
   
 
 0.577
CCH79_00001783
DDE_Tnp_1_7 domain-containing protein.
   
 
 0.576
ENSGAFP00000031137
annotation not available
    
 0.569
CCH79_00010671
SAM domain-containing protein.
      
 0.544
ENSGAFP00000003345
annotation not available
   
  0.522
CCH79_00004111
MI domain-containing protein.
      
 0.514
CCH79_00006686
L51_S25_CI-B8 domain-containing protein.
    
 
 0.505
CCH79_00017269
Uncharacterized protein.
    
  0.478
CCH79_00010822
Uncharacterized protein.
    
  0.478
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.