STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000004858Macrophage migration inhibitory factor. (134 aa)    
Predicted Functional Partners:
CCH79_00010451
Aspartate aminotransferase.
   
 
 0.916
GOT1
Aspartate aminotransferase.
   
 
 0.916
CCH79_00002179
Uncharacterized protein.
     
 0.912
CCH79_00001642
Aspartate aminotransferase.
   
 
 0.905
CCH79_00006766
Uncharacterized protein.
     
 0.903
CCH79_00020160
Uncharacterized protein.
     
 0.897
ENSGAFP00000010297
annotation not available
     
 0.897
ENSGAFP00000029199
Si:dkey-40g16.6.
   
 
  0.876
CCH79_00006060
Thyroglobulin type-1 domain-containing protein.
   
 0.868
CCH79_00016159
Uncharacterized protein.
   
 0.816
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.