STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000004897annotation not available (309 aa)    
Predicted Functional Partners:
CCH79_00004026
Uncharacterized protein.
     
 0.903
CCH79_00019312
Asp_Arg_Hydrox domain-containing protein.
   
 
 0.898
CCH79_00004025
Uncharacterized protein.
     
 0.883
CCH79_00000627
Uncharacterized protein.
    
  0.864
CCH79_00020221
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.862
CCH79_00002689
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.832
CCH79_00004726
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.789
CCH79_00001398
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.789
ENSGAFP00000017869
Calmodulin 3b (phosphorylase kinase, delta).
    
 0.789
ENSGAFP00000028964
annotation not available
    
 0.789
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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