STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012881TINF2_N domain-containing protein. (542 aa)    
Predicted Functional Partners:
CCH79_00020849
Uncharacterized protein.
    
 0.995
CCH79_00006147
HTH myb-type domain-containing protein.
    
 0.991
CCH79_00016549
POT1PC domain-containing protein.
    
 0.982
CCH79_00016550
Telo_bind domain-containing protein.
    
 0.982
ENSGAFP00000018638
annotation not available
    
 0.978
CCH79_00011878
Ribosomal_L7Ae domain-containing protein.
    
 0.865
ENSGAFP00000009956
NOP10 ribonucleoprotein homolog (yeast).
     
 0.832
CCH79_00007755
PUA domain-containing protein.
    
 0.830
CCH79_00008516
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
     
 0.813
CCH79_00015545
WD_REPEATS_REGION domain-containing protein.
     
 0.806
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.