STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000684Amidohydro-rel domain-containing protein. (641 aa)    
Predicted Functional Partners:
CCH79_00002966
OMPdecase domain-containing protein.
  
 
 0.908
CCH79_00005129
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
  
 0.895
CCH79_00005042
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.892
GOLT1B
Uncharacterized protein.
  
 
 0.812
CCH79_00016311
Uncharacterized protein.
  
 
 0.812
CCH79_00000619
Uncharacterized protein.
  
 0.804
CCH79_00002906
Uncharacterized protein.
  
 0.804
CCH79_00002699
Uncharacterized protein.
  
 0.802
CCH79_00012308
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
 0.802
CCH79_00019790
Uncharacterized protein.
  
 0.802
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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