STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012643Uncharacterized protein. (972 aa)    
Predicted Functional Partners:
CCH79_00014118
BZIP domain-containing protein.
    
 0.951
CCH79_00007219
BZIP domain-containing protein.
    
 0.936
ENSGAFP00000008626
Wolfram syndrome 1a (wolframin).
  
  
 
0.893
CCH79_00013289
BZIP domain-containing protein.
     
 0.668
CCH79_00016757
Fam20C domain-containing protein.
     
 0.596
ENSGAFP00000003212
annotation not available
     
 0.594
ENSGAFP00000003118
Zinc finger CCCH-type containing 10.
      
 0.587
CCH79_00007374
Fam20C domain-containing protein.
     
 0.554
CCH79_00009594
SAM domain-containing protein.
     
 0.530
CCH79_00001668
Stork_head domain-containing protein.
      
 0.481
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.