STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00002399Uncharacterized protein. (601 aa)    
Predicted Functional Partners:
CDC42
Uncharacterized protein.
     
 0.661
ENSGAFP00000009867
annotation not available
     
 0.661
CCH79_00001430
Uncharacterized protein.
     
0.647
CCH79_00019293
HP domain-containing protein.
 
   
 0.647
CCH79_00009870
Aldolase_II domain-containing protein.
   
 0.589
CCH79_00001749
Aldolase_II domain-containing protein.
   
 0.589
CCH79_00000979
Aldolase_II domain-containing protein.
   
 0.589
CCH79_00014244
Aldolase_II domain-containing protein.
   
 0.589
CCH79_00006279
Aldolase_II domain-containing protein.
   
 0.556
CCH79_00014151
Uncharacterized protein.
     
 0.538
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.