STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004390S4 RNA-binding domain-containing protein. (545 aa)    
Predicted Functional Partners:
CCH79_00007636
Uncharacterized protein.
  
 
 0.916
CCH79_00009402
Uncharacterized protein.
  
 
 0.904
CCH79_00010297
SpoU_sub_bind domain-containing protein.
  
 
 0.892
ENSGAFP00000026749
Mitochondrial ribosomal protein L21.
  
   0.879
CCH79_00011583
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.878
CCH79_00015727
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.877
CCH79_00013728
EngB-type G domain-containing protein.
   
 
 0.867
CCH79_00011711
TRUD domain-containing protein.
   
 
 0.857
CCH79_00015204
TRUD domain-containing protein.
   
 
 0.855
CCH79_00008498
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.855
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (40%) [HD]