STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00014530Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
CCH79_00011047
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.996
CCH79_00001373
Uncharacterized protein.
    
 
 0.959
CCH79_00010533
Uncharacterized protein.
    
 
 0.952
CCH79_00003439
Uncharacterized protein.
    
 
 0.952
CCH79_00004273
Fork-head domain-containing protein.
    
 0.862
CCH79_00000040
Uncharacterized protein.
    
 
 0.777
CCH79_00020350
Uncharacterized protein.
    
 
 0.777
ENSGAFP00000026820
General transcription factor IIB.
    
 
 0.754
CCH79_00016086
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.624
ENSGAFP00000024675
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 
 0.565
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.