STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008653T-box_assoc domain-containing protein. (644 aa)    
Predicted Functional Partners:
CCH79_00004273
Fork-head domain-containing protein.
     
 0.650
CCH79_00008602
Uncharacterized protein.
  
 
0.621
CCH79_00005391
Uncharacterized protein.
    
 0.616
CCH79_00000360
Homeobox domain-containing protein.
   
 0.606
CCH79_00017263
Uncharacterized protein.
   
 
0.603
CCH79_00001511
Uncharacterized protein.
   
 
0.603
CCH79_00003332
T-box_assoc domain-containing protein.
  
 
0.595
CCH79_00000778
POU domain protein.
   
 0.593
CCH79_00007436
Uncharacterized protein.
     
 0.574
ENSGAFP00000009160
Transcription factor 7.
   
 0.513
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.