STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00002400Uncharacterized protein. (760 aa)    
Predicted Functional Partners:
CCH79_00008903
Ribosomal_L7Ae domain-containing protein.
    
   0.759
CCH79_00003526
Uncharacterized protein.
      
 0.589
CCH79_00003760
Vps53_N domain-containing protein.
      
 0.587
CCH79_00005125
Alpha-carbonic anhydrase domain-containing protein.
      
 0.535
CCH79_00000871
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
      
 0.535
ENSGAFP00000011592
annotation not available
    
   0.534
DLK1
Uncharacterized protein.
      
 0.530
CCH79_00016813
PH domain-containing protein.
    
   0.472
CCH79_00010165
PH domain-containing protein.
    
   0.472
SRC
SRC proto-oncogene, non-receptor tyrosine kinase.
    
 
 0.462
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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