STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A12Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (673 aa)    
Predicted Functional Partners:
CCH79_00008704
NADH_4Fe-4S domain-containing protein.
    
 
 0.507
TIMM22
Uncharacterized protein.
     
 0.505
ENSGAFP00000003336
leucyl-tRNA synthetase 2, mitochondrial.
    
 
 0.496
CCH79_00007125
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
     
 0.489
CCH79_00019819
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.481
CCH79_00018111
Uncharacterized protein.
      
 0.481
CCH79_00009253
VPS37 C-terminal domain-containing protein.
      
 0.481
PNPT1
S1 motif domain-containing protein.
      
 0.481
KIF5C
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.481
ENSGAFP00000004817
Ddb1 and cul4 associated factor 17.
      
 0.480
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.