STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00006531Uncharacterized protein. (1015 aa)    
Predicted Functional Partners:
ENSGAFP00000007617
Translocase of outer mitochondrial membrane 20.
    
 0.738
CCH79_00010710
Uncharacterized protein.
   
 0.684
CCH79_00016994
Phosphodiesterase.
    
 
 0.618
PTK7
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.606
CCH79_00006231
Uncharacterized protein.
   
 0.595
ENSGAFP00000021677
Matrix metallopeptidase 13b.
   
 0.595
ENSGAFP00000021714
Matrix metallopeptidase 20b (enamelysin).
   
 0.595
CCH79_00003606
Uncharacterized protein.
   
 0.595
CCH79_00007862
Uncharacterized protein.
   
 0.594
CCH79_00020698
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
   
 0.594
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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