STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNAB3Aldo_ket_red domain-containing protein. (414 aa)    
Predicted Functional Partners:
ENSGAFP00000019834
Potassium voltage-gated channel, subfamily F, member 1a.
    
 0.780
ENSGAFP00000026704
Nucleoporin 133.
   
 0.771
ENSGAFP00000021548
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.762
ENSGAFP00000030947
Nucleoporin 107.
   
 0.762
CCH79_00000337
Uncharacterized protein.
    
 0.747
CCH79_00019571
Uncharacterized protein.
    
 0.747
CCH79_00018191
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.728
CCH79_00014592
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.727
CCH79_00013004
BTB domain-containing protein.
    
 0.719
CCH79_00018931
BTB domain-containing protein; Belongs to the potassium channel family.
    
 0.719
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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