STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001949Sialidase domain-containing protein. (464 aa)    
Predicted Functional Partners:
CCH79_00012316
Sulfatase domain-containing protein.
  
 0.934
CCH79_00009301
UDPGT domain-containing protein; Belongs to the UDP-glycosyltransferase family.
   
 
  0.904
CCH79_00008630
Sialidase domain-containing protein.
  
  
0.837
CCH79_00016761
Sulfatase domain-containing protein.
  
 0.787
CCH79_00002922
Sulfatase domain-containing protein.
  
 0.786
CCH79_00001239
Sialidase domain-containing protein.
  
  
0.772
ENSGAFP00000018598
Sialidase 4.
  
  
 
0.732
CCH79_00019194
Carboxypeptidase; Belongs to the peptidase S10 family.
    
 0.657
CCH79_00018213
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 0.628
CCH79_00009896
IFT81_CH domain-containing protein.
    
 0.615
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.