STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000021Fibronectin type-III domain-containing protein. (220 aa)    
Predicted Functional Partners:
CCH79_00000015
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
      
 0.598
CCH79_00000017
Uncharacterized protein.
      
 0.598
CCH79_00000016
Uncharacterized protein.
      
 0.586
CCH79_00000010
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
      
 0.583
CCH79_00011294
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.503
ENSGAFP00000003403
Calcitonin gene-related peptide-receptor component protein.
      
 0.480
CCH79_00007387
Methyltransf_25 domain-containing protein.
      
 0.480
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.