STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001414Uncharacterized protein. (546 aa)    
Predicted Functional Partners:
CCH79_00016702
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.587
CCH79_00001393
Uncharacterized protein.
    
 0.581
CCH79_00009332
Uncharacterized protein.
    
 0.581
CCH79_00009635
Uncharacterized protein.
   
  0.570
ENSGAFP00000010278
annotation not available
    
 0.544
CCH79_00013049
Uncharacterized protein.
  
  
 0.539
CCH79_00003722
Uncharacterized protein.
     
 0.538
CCH79_00004879
ANK_REP_REGION domain-containing protein.
  
 
  0.534
CCH79_00007089
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.526
ENSGAFP00000002036
Solute carrier family 13 member 5a.
    
 0.497
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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