STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001951Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
CCH79_00014611
Fam20C domain-containing protein.
    
  0.680
CCH79_00000170
TGF_BETA_2 domain-containing protein.
    
 0.655
CCH79_00003866
TGF_BETA_2 domain-containing protein.
    
 0.655
CCH79_00004754
TGF_BETA_2 domain-containing protein.
    
 0.655
CCH79_00013661
Fam20C domain-containing protein.
    
  0.639
CCH79_00015091
Fam20C domain-containing protein.
    
  0.639
PTK7
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.606
ENSGAFP00000007617
Translocase of outer mitochondrial membrane 20.
    
 0.587
CCH79_00007750
ARID domain-containing protein.
    
 0.587
ENSGAFP00000006400
annotation not available
    
  0.583
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.