STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012887Uncharacterized protein. (136 aa)    
Predicted Functional Partners:
CCH79_00016847
Uncharacterized protein.
   
 
 0.978
ENSGAFP00000018407
Mitochondrial ribosomal protein S16.
   
   0.978
ENSGAFP00000032061
Mitochondrial ribosomal protein L20.
   
 
 0.966
CCH79_00009011
Uncharacterized protein.
    
 
 0.963
CCH79_00008712
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.962
CCH79_00007516
Uncharacterized protein.
   
 
 0.955
ENSGAFP00000009267
Mitochondrial ribosomal protein L14.
   
   0.955
CCH79_00018416
Uncharacterized protein.
   
 
 0.955
CCH79_00005006
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.953
CCH79_00014671
Uncharacterized protein.
   
 
 0.952
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.