STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000005173Transmembrane protein 238a. (110 aa)    
Predicted Functional Partners:
CCH79_00001432
MADS-box domain-containing protein.
    
 0.578
ENSGAFP00000019975
annotation not available
    
 0.578
CCH79_00003483
Ion_trans domain-containing protein.
    
 0.567
ENSGAFP00000004038
annotation not available
    
 0.567
CCH79_00013620
Uncharacterized protein.
    
 0.567
CCH79_00015061
Uncharacterized protein.
    
 0.567
CCH79_00007906
PDZ domain-containing protein.
    
 0.567
CCH79_00014559
Voltage-dependent T-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. This channel gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite ne [...]
    
 0.567
CCH79_00001627
LID domain-containing protein.
    
 0.525
CCH79_00012715
LID domain-containing protein.
    
 0.525
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.