STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000005231Lysine (K)-specific demethylase 5Ba. (971 aa)    
Predicted Functional Partners:
CCH79_00007313
ATP-synt_DE_N domain-containing protein.
  
 0.973
CCH79_00017444
Uncharacterized protein.
  
 0.973
CCH79_00005988
Uncharacterized protein.
  
 0.973
CCH79_00007082
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.945
ENSGAFP00000019001
ATP synthase F1 subunit alpha.
  
 0.945
CCH79_00014230
Uncharacterized protein.
   
 0.923
CCH79_00010686
Uncharacterized protein.
   
 0.919
CCH79_00002780
ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.
  
 0.877
CCH79_00013588
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
  
 0.877
CCH79_00005018
ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.
  
 0.877
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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