ENSGAFP00000005259 protein (Gambusia affinis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

ENSGAFP00000005259

annotation not available (163 aa)

Predicted Functional Partners:

CCH79_00007090

0.601

CCH79_00001216

0.585

CCH79_00018053

0.579

CCH79_00004609

0.579

CCH79_00003700

0.562

CCH79_00019115

0.552

SMARCB1

0.552

CCH79_00007392

0.542

SS18L1

0.521

CCH79_00005338

0.521

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00001216	CCH79_00003700	ENSGAFP00000006364	ENSGAFP00000010428	Uncharacterized protein.	Uncharacterized protein.	0.765
CCH79_00001216	CCH79_00005338	ENSGAFP00000006364	ENSGAFP00000031752	Uncharacterized protein.	Uncharacterized protein.	0.976
CCH79_00001216	CCH79_00007090	ENSGAFP00000006364	ENSGAFP00000019866	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.972
CCH79_00001216	CCH79_00007392	ENSGAFP00000006364	ENSGAFP00000010244	Uncharacterized protein.	Uncharacterized protein.	0.694
CCH79_00001216	CCH79_00019115	ENSGAFP00000006364	ENSGAFP00000007451	Uncharacterized protein.	Uncharacterized protein.	0.967
CCH79_00001216	ENSGAFP00000005259	ENSGAFP00000006364	ENSGAFP00000005259	Uncharacterized protein.	annotation not available	0.585
CCH79_00001216	SMARCB1	ENSGAFP00000006364	ENSGAFP00000009368	Uncharacterized protein.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.967
CCH79_00001216	SS18L1	ENSGAFP00000006364	ENSGAFP00000020303	Uncharacterized protein.	Uncharacterized protein.	0.976
CCH79_00003700	CCH79_00001216	ENSGAFP00000010428	ENSGAFP00000006364	Uncharacterized protein.	Uncharacterized protein.	0.765
CCH79_00003700	CCH79_00005338	ENSGAFP00000010428	ENSGAFP00000031752	Uncharacterized protein.	Uncharacterized protein.	0.895
CCH79_00003700	CCH79_00007090	ENSGAFP00000010428	ENSGAFP00000019866	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.967
CCH79_00003700	CCH79_00007392	ENSGAFP00000010428	ENSGAFP00000010244	Uncharacterized protein.	Uncharacterized protein.	0.694
CCH79_00003700	CCH79_00019115	ENSGAFP00000010428	ENSGAFP00000007451	Uncharacterized protein.	Uncharacterized protein.	0.857
CCH79_00003700	ENSGAFP00000005259	ENSGAFP00000010428	ENSGAFP00000005259	Uncharacterized protein.	annotation not available	0.562
CCH79_00003700	SMARCB1	ENSGAFP00000010428	ENSGAFP00000009368	Uncharacterized protein.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.857
CCH79_00003700	SS18L1	ENSGAFP00000010428	ENSGAFP00000020303	Uncharacterized protein.	Uncharacterized protein.	0.895
CCH79_00004609	CCH79_00007090	ENSGAFP00000026110	ENSGAFP00000019866	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.522
CCH79_00004609	CCH79_00007392	ENSGAFP00000026110	ENSGAFP00000010244	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.409
CCH79_00004609	CCH79_00018053	ENSGAFP00000026110	ENSGAFP00000004961	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.900
CCH79_00004609	CCH79_00019115	ENSGAFP00000026110	ENSGAFP00000007451	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.691