STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017194Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
ENSGAFP00000005817
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.970
ENSGAFP00000024624
Syntaxin 5A.
    
 0.960
ENSGAFP00000010629
Sec1 family domain containing 1.
    
 0.959
ENSGAFP00000005586
Syntaxin 16.
    
 0.957
CCH79_00009065
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.942
CCH79_00015689
Uncharacterized protein.
   
 0.926
CCH79_00003325
Uncharacterized protein.
   
 0.926
CCH79_00007876
t-SNARE coiled-coil homology domain-containing protein.
    
 0.925
CCH79_00009916
V-SNARE coiled-coil homology domain-containing protein.
    
 0.919
CCH79_00008462
t-SNARE coiled-coil homology domain-containing protein.
    
 0.908
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.