STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001959Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
CCH79_00012138
Uncharacterized protein.
    
 
0.716
CCH79_00002319
Protein kinase domain-containing protein.
    
 
0.716
CCH79_00008857
Uncharacterized protein.
 
  
 
 0.672
ENSGAFP00000016725
annotation not available
    
 
 0.637
CCH79_00007773
Tubulin domain-containing protein; Belongs to the tubulin family.
    
 
 0.637
CCH79_00008122
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.637
ENSGAFP00000020806
annotation not available
    
 
 0.637
ENSGAFP00000026993
annotation not available
    
 
 0.637
ENSGAFP00000028679
annotation not available
    
 
 0.637
ENSGAFP00000030155
annotation not available
    
 
 0.637
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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