STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00016591VWFA domain-containing protein; Belongs to the integrin alpha chain family. (1089 aa)    
Predicted Functional Partners:
CCH79_00009749
Integrin beta; Belongs to the integrin beta chain family.
   
 0.953
CCH79_00016302
Integrin beta.
   
 0.953
CCH79_00001154
Fibrinogen C-terminal domain-containing protein.
    
 0.904
CCH79_00005289
Uncharacterized protein.
   
 0.904
CCH79_00005291
Uncharacterized protein.
    
 0.904
CCH79_00010182
Uncharacterized protein.
    
 0.901
ENSGAFP00000010805
annotation not available
    
 0.899
ENSGAFP00000003649
annotation not available
   
  0.896
CCH79_00001093
Uncharacterized protein.
   
 0.896
CCH79_00017930
Uncharacterized protein.
   
  0.896
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.