STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000005310annotation not available (119 aa)    
Predicted Functional Partners:
CCH79_00006517
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.998
CCH79_00007392
Uncharacterized protein.
   
 0.996
CCH79_00005306
UBX domain-containing protein.
    
 0.995
ENSGAFP00000003099
annotation not available
   
 0.991
ENSGAFP00000008603
Thyroid hormone receptor interactor 12.
   
 0.972
CCH79_00003314
PB1 domain-containing protein.
   
 0.969
CCH79_00019618
Uncharacterized protein.
    
 0.957
CCH79_00003638
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.947
CCH79_00001707
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.946
CCH79_00014111
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
   
 0.937
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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