ILRUN protein (Gambusia affinis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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gene neighborhood

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Score

ILRUN

N_BRCA1_IG domain-containing protein. (324 aa)

Predicted Functional Partners:

ENSGAFP00000000409

0.699

CCH79_00012575

0.699

CCH79_00012966

0.699

CCH79_00019913

0.699

CCH79_00010899

0.699

ENSGAFP00000021930

0.699

ENSGAFP00000032599

0.699

CCH79_00016885

0.671

CCH79_00003314

0.663

CCH79_00005491

0.663

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00003314	CCH79_00005491	ENSGAFP00000018379	ENSGAFP00000024348	PB1 domain-containing protein.	Uncharacterized protein.	0.999
CCH79_00003314	CCH79_00010899	ENSGAFP00000018379	ENSGAFP00000020585	PB1 domain-containing protein.	Uncharacterized protein.	0.996
CCH79_00003314	CCH79_00012575	ENSGAFP00000018379	ENSGAFP00000001129	PB1 domain-containing protein.	Uncharacterized protein.	0.996
CCH79_00003314	CCH79_00012966	ENSGAFP00000018379	ENSGAFP00000008174	PB1 domain-containing protein.	Uncharacterized protein.	0.997
CCH79_00003314	CCH79_00016885	ENSGAFP00000018379	ENSGAFP00000023685	PB1 domain-containing protein.	Uncharacterized protein.	0.869
CCH79_00003314	CCH79_00019913	ENSGAFP00000018379	ENSGAFP00000012012	PB1 domain-containing protein.	Uncharacterized protein.	0.996
CCH79_00003314	ENSGAFP00000000409	ENSGAFP00000018379	ENSGAFP00000000409	PB1 domain-containing protein.	Microtubule-associated protein 1 light chain 3 gamma.	0.996
CCH79_00003314	ENSGAFP00000021930	ENSGAFP00000018379	ENSGAFP00000021930	PB1 domain-containing protein.	Microtubule-associated protein 1 light chain 3 beta.	0.996
CCH79_00003314	ENSGAFP00000032599	ENSGAFP00000018379	ENSGAFP00000032599	PB1 domain-containing protein.	GABA(A) receptor-associated protein like 2.	0.997
CCH79_00003314	ILRUN	ENSGAFP00000018379	ENSGAFP00000005329	PB1 domain-containing protein.	N_BRCA1_IG domain-containing protein.	0.663
CCH79_00005491	CCH79_00003314	ENSGAFP00000024348	ENSGAFP00000018379	Uncharacterized protein.	PB1 domain-containing protein.	0.999
CCH79_00005491	CCH79_00010899	ENSGAFP00000024348	ENSGAFP00000020585	Uncharacterized protein.	Uncharacterized protein.	0.972
CCH79_00005491	CCH79_00012575	ENSGAFP00000024348	ENSGAFP00000001129	Uncharacterized protein.	Uncharacterized protein.	0.972
CCH79_00005491	CCH79_00012966	ENSGAFP00000024348	ENSGAFP00000008174	Uncharacterized protein.	Uncharacterized protein.	0.992
CCH79_00005491	CCH79_00019913	ENSGAFP00000024348	ENSGAFP00000012012	Uncharacterized protein.	Uncharacterized protein.	0.997
CCH79_00005491	ENSGAFP00000000409	ENSGAFP00000024348	ENSGAFP00000000409	Uncharacterized protein.	Microtubule-associated protein 1 light chain 3 gamma.	0.999
CCH79_00005491	ENSGAFP00000021930	ENSGAFP00000024348	ENSGAFP00000021930	Uncharacterized protein.	Microtubule-associated protein 1 light chain 3 beta.	0.997
CCH79_00005491	ENSGAFP00000032599	ENSGAFP00000024348	ENSGAFP00000032599	Uncharacterized protein.	GABA(A) receptor-associated protein like 2.	0.992
CCH79_00005491	ILRUN	ENSGAFP00000024348	ENSGAFP00000005329	Uncharacterized protein.	N_BRCA1_IG domain-containing protein.	0.663
CCH79_00010899	CCH79_00003314	ENSGAFP00000020585	ENSGAFP00000018379	Uncharacterized protein.	PB1 domain-containing protein.	0.996