ENSGAFP00000005331 protein (Gambusia affinis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSGAFP00000005331

annotation not available (270 aa)

Predicted Functional Partners:

CCH79_00011561

0.906

CCH79_00011573

0.900

CCH79_00002088

0.762

CCH79_00010240

0.676

ENSGAFP00000007212

0.612

ENSGAFP00000019821

0.612

CCH79_00014522

0.575

ENSGAFP00000007026

0.562

CCH79_00018958

0.562

CCH79_00010931

0.562

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00002088	CCH79_00011573	ENSGAFP00000010295	ENSGAFP00000015050	Uncharacterized protein.	Uncharacterized protein.	0.762
CCH79_00002088	ENSGAFP00000005331	ENSGAFP00000010295	ENSGAFP00000005331	Uncharacterized protein.	annotation not available	0.762
CCH79_00002088	ENSGAFP00000007212	ENSGAFP00000010295	ENSGAFP00000007212	Uncharacterized protein.	Leucine rich repeat and Ig domain containing 1a.	0.745
CCH79_00002088	ENSGAFP00000019821	ENSGAFP00000010295	ENSGAFP00000019821	Uncharacterized protein.	Leucine rich repeat and Ig domain containing 1b.	0.745
CCH79_00010240	CCH79_00011573	ENSGAFP00000016454	ENSGAFP00000015050	Uncharacterized protein.	Uncharacterized protein.	0.739
CCH79_00010240	ENSGAFP00000005331	ENSGAFP00000016454	ENSGAFP00000005331	Uncharacterized protein.	annotation not available	0.676
CCH79_00010240	ENSGAFP00000007212	ENSGAFP00000016454	ENSGAFP00000007212	Uncharacterized protein.	Leucine rich repeat and Ig domain containing 1a.	0.745
CCH79_00010240	ENSGAFP00000019821	ENSGAFP00000016454	ENSGAFP00000019821	Uncharacterized protein.	Leucine rich repeat and Ig domain containing 1b.	0.745
CCH79_00010931	CCH79_00011573	ENSGAFP00000021246	ENSGAFP00000015050	Uncharacterized protein.	Uncharacterized protein.	0.562
CCH79_00010931	ENSGAFP00000005331	ENSGAFP00000021246	ENSGAFP00000005331	Uncharacterized protein.	annotation not available	0.562
CCH79_00011561	CCH79_00011573	ENSGAFP00000014820	ENSGAFP00000015050	Uncharacterized protein.	Uncharacterized protein.	0.906
CCH79_00011561	ENSGAFP00000005331	ENSGAFP00000014820	ENSGAFP00000005331	Uncharacterized protein.	annotation not available	0.906
CCH79_00011573	CCH79_00002088	ENSGAFP00000015050	ENSGAFP00000010295	Uncharacterized protein.	Uncharacterized protein.	0.762
CCH79_00011573	CCH79_00010240	ENSGAFP00000015050	ENSGAFP00000016454	Uncharacterized protein.	Uncharacterized protein.	0.739
CCH79_00011573	CCH79_00010931	ENSGAFP00000015050	ENSGAFP00000021246	Uncharacterized protein.	Uncharacterized protein.	0.562
CCH79_00011573	CCH79_00011561	ENSGAFP00000015050	ENSGAFP00000014820	Uncharacterized protein.	Uncharacterized protein.	0.906
CCH79_00011573	CCH79_00014522	ENSGAFP00000015050	ENSGAFP00000004506	Uncharacterized protein.	Uncharacterized protein.	0.575
CCH79_00011573	CCH79_00018958	ENSGAFP00000015050	ENSGAFP00000007789	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.562
CCH79_00011573	ENSGAFP00000005331	ENSGAFP00000015050	ENSGAFP00000005331	Uncharacterized protein.	annotation not available	0.900
CCH79_00011573	ENSGAFP00000007026	ENSGAFP00000015050	ENSGAFP00000007026	Uncharacterized protein.	Protein tyrosine phosphatase non-receptor type 11a.	0.562