STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012899Uncharacterized protein. (479 aa)    
Predicted Functional Partners:
ENSGAFP00000030230
SEC61 translocon alpha 1 subunit, like.
   
 0.951
ENSGAFP00000032200
annotation not available
   
 0.951
MRPL58
RF_PROK_I domain-containing protein.
  
 
 0.911
CCH79_00007516
Uncharacterized protein.
  
 
 0.909
CCH79_00007763
SRP54 domain-containing protein.
  
 0.899
CCH79_00009264
Tim44 domain-containing protein.
   
 
 0.896
CCH79_00011583
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.893
CCH79_00008335
Uncharacterized protein.
   
 
 0.890
CCH79_00001435
Ribosomal_L2_C domain-containing protein.
   
 
 0.889
CCH79_00009270
Uncharacterized protein.
   
 
 0.889
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.