STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019060Fork-head domain-containing protein. (450 aa)    
Predicted Functional Partners:
CCH79_00020782
Uncharacterized protein.
  
 0.764
ENSGAFP00000002636
GATA binding protein 5.
   
 0.696
CCH79_00000343
Uncharacterized protein.
   
 0.696
ENSGAFP00000029237
annotation not available
   
 0.696
CCH79_00008737
Uncharacterized protein.
    
 0.681
ENSGAFP00000031635
Nuclear receptor subfamily 1, group I, member 2.
    
 0.678
CCH79_00017445
GATA-type domain-containing protein.
    
 0.671
ENSGAFP00000030343
GATA binding protein 2a.
    
 0.671
GATA2
GATA binding protein 2.
    
 0.671
CCH79_00015740
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.658
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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