STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001422Uncharacterized protein. (1240 aa)    
Predicted Functional Partners:
CCH79_00016673
Uncharacterized protein.
   
    0.806
CCH79_00014582
Uncharacterized protein.
    
 
 0.801
CCH79_00008823
Uncharacterized protein.
     
 0.789
CCH79_00011620
N-acetyltransferase domain-containing protein.
    
   0.753
CCH79_00005306
UBX domain-containing protein.
   
   0.668
CCH79_00003722
Uncharacterized protein.
    
  0.637
CCH79_00016702
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.636
ENSGAFP00000006097
Ankyrin repeat domain 50-like.
     
 0.634
CCH79_00001393
Uncharacterized protein.
    
  0.627
CCH79_00009332
Uncharacterized protein.
    
  0.627
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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