STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00020598Uncharacterized protein. (249 aa)    
Predicted Functional Partners:
CCH79_00011319
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.728
CCH79_00011031
SCP2 domain-containing protein.
    
 0.728
ENSGAFP00000001260
Lysophospholipase 1.
     
 0.630
CCH79_00017835
Uncharacterized protein.
     
 0.630
CCH79_00016477
Uncharacterized protein.
    
 0.550
CCH79_00011006
4HBT domain-containing protein.
     
 0.526
CCH79_00017828
Lactamase_B domain-containing protein.
     
 0.516
CCH79_00011404
AB hydrolase-1 domain-containing protein.
  
 
 0.509
CCH79_00007686
Uncharacterized protein.
  
 
 0.505
CCH79_00015957
Uncharacterized protein.
   
 
 0.494
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.