STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00015936EAF domain-containing protein. (296 aa)    
Predicted Functional Partners:
CCH79_00002442
Uncharacterized protein.
    
 0.946
CCH79_00010796
Ig-like domain-containing protein.
  
 
0.946
CCH79_00007272
Uncharacterized protein.
    
 0.908
CCH79_00003630
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.876
CCH79_00004786
Uncharacterized protein.
    
 0.868
CCH79_00009419
AHD domain-containing protein.
   
 0.857
CCH79_00014440
Uncharacterized protein.
   
 0.857
CCH79_00010170
RPOLD domain-containing protein.
    
 0.852
ENSGAFP00000027640
SPT5 homolog, DSIF elongation factor subunit.
    
 0.842
CCH79_00001013
Uncharacterized protein.
    
 0.834
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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