STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00002775Cir_N domain-containing protein. (459 aa)    
Predicted Functional Partners:
CCH79_00012392
Uncharacterized protein.
    
 0.975
CCH79_00012918
Uncharacterized protein.
    
 0.973
ENSGAFP00000022473
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.971
HDAC2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.919
CCH79_00008564
Hist_deacetyl domain-containing protein.
    
 0.919
HDAC1
Hist_deacetyl domain-containing protein.
    
 0.919
CCH79_00000213
SKIP_SNW domain-containing protein.
   
 
 0.913
CCH79_00014034
Cir_N domain-containing protein.
   
 
 0.911
ENSGAFP00000006858
Nuclear receptor corepressor 2.
    
 0.908
CCH79_00011954
Uncharacterized protein.
    
 0.872
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.