STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008655Ubiquitin-like domain-containing protein. (377 aa)    
Predicted Functional Partners:
CCH79_00015081
BZIP domain-containing protein.
   
 
 0.552
CCH79_00005792
RING-type domain-containing protein.
   
 
 0.549
CCH79_00006156
Uncharacterized protein.
   
 
 0.543
CCH79_00002394
RING-type domain-containing protein.
    
 
 0.419
CCH79_00007838
RING-type domain-containing protein.
    
 
 0.419
CCH79_00014137
RING-type domain-containing protein.
    
 
 0.414
CCH79_00009846
Uncharacterized protein.
    
 
 0.414
CCH79_00011136
Uncharacterized protein.
    
 
 0.414
CCH79_00000107
Fibronectin type-II domain-containing protein.
    
 
 0.409
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.