STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00020702Uncharacterized protein. (185 aa)    
Predicted Functional Partners:
CCH79_00020640
Sema domain-containing protein.
 
     0.751
CCH79_00020701
Uncharacterized protein.
 
      0.705
CCH79_00011579
Uncharacterized protein.
    
 0.667
CCH79_00011907
Uncharacterized protein.
    
 0.667
ENSGAFP00000016164
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.667
CCH79_00009191
PH domain-containing protein.
    
 0.611
CCH79_00001428
Uncharacterized protein.
    
  0.591
CCH79_00012979
Uncharacterized protein.
    
  0.591
PTK7
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.543
CCH79_00019933
Plexin_cytopl domain-containing protein.
 
      0.516
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.